.TH "sisu" "1" "2012-10-03" "4.0.0" "SiSU"
.br
.SH NAME
.br
sisu \- documents: markup, structuring, publishing in multiple standard formats, and search
.br
.SH SYNOPSIS
.br
sisu [\-short\-options|\-\-long\-options] [filename/wildcard]

.br
sisu [\-abCcDdeFGghIikLMmNnoPpQqRrSsTtUuVvWwXxYyZ_0\-9] [filename/wildcard]

.br
sisu \-\-txt \-\-html \-\-epub \-\-odt \-\-pdf \-\-wordmap \-\-sqlite \-\-manpage \-\-texinfo \-\-sisupod \-\-source \-\-qrcode [filename/wildcard]

.br
sisu [\-Ddcv] [instruction] [filename/wildcard]

.br
sisu \-\-pg (\-\-createdb|update [filename/wildcard]|\-\-dropall)

.br
sisu [operations]

.br
sisu [\-CcFLSVvW]

.br
sisu (\-\-configure|\-\-webrick|\-\-sample\-search\-form)
.SH SISU \- MANUAL,
RALPH AMISSAH
.br

.SH WHAT IS SISU?
.br

.SH INTRODUCTION \- WHAT IS SISU?
.br

.br
.B SiSU
is a framework for document structuring, publishing (in multiple open standard
formats) and search, comprising of: (a) a lightweight document structure and
presentation markup syntax; and (b) an accompanying engine for generating
standard document format outputs from documents prepared in sisu markup syntax,
which is able to produce multiple standard outputs (including the population of
sql databases) that (can) share a common numbering system for the citation of
text within a document.

.br
.B SiSU
is developed under an open source, software libre license (
.I GPLv3
). Its use case for development is work with medium to large document sets and
cope with evolving document formats/ representation technologies. Documents are
prepared once, and generated as need be to update the technical presentation or
add additional output formats. Various output formats (including search related
output) share a common mechanism for cross\-output\-format citation.

.br
.B SiSU
both defines a markup syntax and provides an engine that produces open
standards format outputs from documents prepared with
.B SiSU
markup. From a single lightly prepared document sisu custom builds several
standard output formats which share a common (text object) numbering system for
citation of content within a document (that also has implications for search).
The sisu engine works with an abstraction of the document's structure and
content from which it is possible to generate different forms of representation
of the document. Significantly
.B SiSU
markup is more sparse than html and outputs which include
.I HTML,
.I EPUB,
.I ODT
(Open Document Format text),
.I LaTeX,
landscape and portrait
.I PDF,
all of which can be added to and updated.
.B SiSU
is also able to populate
.I SQL
type databases at an object level, which means that searches can be made with
that degree of granularity.

.br
Source document preparation and output generation is a two step process: (i)
document source is prepared, that is, marked up in sisu markup syntax and (ii)
the desired output subsequently generated by running the sisu engine against
document source. Output representations if updated (in the sisu engine) can be
generated by re\-running the engine against the prepared source. Using
.B SiSU
markup applied to a document,
.B SiSU
custom builds (to take advantage of the strengths of different ways of
representing documents) various standard open output formats including plain
text,
.I HTML,
.I XHTML,
.I XML,
.I EPUB,
.I ODT,
.I LaTeX
or
.I PDF
files, and populate an
.I SQL
database with objects[^1] (equating generally to paragraph\-sized chunks) so
searches may be performed and matches returned with that degree of granularity
( e.g. your search criteria is met by these documents and at these locations
within each document). Document output formats share a common object numbering
system for locating content. This is particularly suitable for "published"
works (finalized texts as opposed to works that are frequently changed or
updated) for which it provides a fixed means of reference of content.

.br
In preparing a
.B SiSU
document you optionally provide semantic information related to the document in
a document header, and in marking up the substantive text provide information
on the structure of the document, primarily indicating heading levels and
footnotes. You also provide information on basic text attributes where used.
The rest is automatic, sisu from this information custom builds[^2] the
different forms of output requested.

.br
.B SiSU
works with an abstraction of the document based on its structure which is
comprised of its headings[^3] and objects[^4], which enables
.B SiSU
to represent the document in many different ways, and to take advantage of the
strengths of different ways of presenting documents. The objects are numbered,
and these numbers can be used to provide a common basis for citing material
within a document across the different output format types. This is significant
as page numbers are not well suited to the digital age, in web publishing,
changing a browser's default font or using a different browser can mean that
text will appear on a different page; and publishing in different formats,
html, landscape and portrait pdf etc. again page numbers are not useful to cite
text. Dealing with documents at an object level together with object numbering
also has implications for search that
.B SiSU
is able to take advantage of.

.br
One of the challenges of maintaining documents is to keep them in a format that
allows use of them independently of proprietary platforms. Consider issues
related to dealing with legacy proprietary formats today and what guarantee you
have that old proprietary formats will remain (or can be read without
proprietary software/equipment) in 15 years time, or the way the way in which
html has evolved over its relatively short span of existence.
.B SiSU
provides the flexibility of producing documents in multiple non\-proprietary
open formats including
.I HTML,
.I EPUB,
[^5]
.I ODT,
[^6]
.I PDF
[^7]
.I ODF,
[^8]. Whilst
.B SiSU
relies on software, the markup is uncomplicated and minimalistic which
guarantees that future engines can be written to run against it. It is also
easily converted to other formats, which means documents prepared in
.B SiSU
can be migrated to other document formats. Further security is provided by the
fact that the software itself,
.B SiSU
is available under
.I GPLv3
a licence that guarantees that the source code will always be open, and free as
in libre, which means that that code base can be used, updated and further
developed as required under the terms of its license. Another challenge is to
keep up with a moving target.
.B SiSU
permits new forms of output to be added as they become important, (Open
Document Format text was added in 2006 when it became an ISO standard for
office applications and the archival of documents),
.I EPUB
was introduced in 2009; and allows the technical representations existing
output to be updated (
.I HTML
has evolved and the related module has been updated repeatedly over the years,
presumably when the World Wide Web Consortium (w3c) finalises
.I HTML
5 which is currently under development, the
.I HTML
module will again be updated allowing all existing documents to be regenerated
as
.I HTML
5).

.br
The document formats are written to the file\-system and available for indexing
by independent indexing tools, whether off the web like Google and Yahoo or on
the site like Lucene and Hyperestraier.

.br
.B SiSU
also provides other features such as concordance files and document content
certificates, and the working against an abstraction of document structure has
further possibilities for the research and development of other document
representations, the availability of objects is useful for example for topic
maps and thesauri, together with the flexibility of
.B SiSU
offers great possibilities.

.br
.B SiSU
is primarily for published works, which can take advantage of the citation
system to reliably reference its documents.
.B SiSU
works well in a complementary manner with such collaborative technologies as
Wikis, which can take advantage of and be used to discuss the substance of
content prepared in
.B SiSU.

.br
<http://www.sisudoc.org/>

.br
<http://www.jus.uio.no/sisu>

.SH COMMANDS SUMMARY
.br

.SH DESCRIPTION

.br
.B SiSU
is a document publishing system, that from a simple single marked\-up document,
produces multiple output formats including:
.I plaintext,
.I HTML,
.I XHTML,
.I XML,
.I EPUB,
.I ODT
(
.I OpenDocument
(
.I ODF
) text),
.I LaTeX,
.I PDF,
info, and
.I SQL
(
.I PostgreSQL
and
.I SQLite
) , which share text object numbers ("object citation numbering") and the same
document structure information. For more see: <http://sisudoc.org> or
<http://www.jus.uio.no/sisu>

.SH DOCUMENT PROCESSING COMMAND FLAGS

.TP
.B \-a [filename/wildcard]
produces
.I plaintext
with Unix linefeeds and without markup, (object numbers are omitted), has
footnotes at end of each paragraph that contains them [ \ \-A \ for \
equivalent \ dos \ (linefeed) \ output \ file] [see \ \-e \ for \ endnotes].
(Options include: \-\-endnotes for endnotes \-\-footnotes for footnotes at the
end of each paragraph \-\-unix for unix linefeed (default) \-\-msdos for msdos
linefeed)

.TP
.B \-b [filename/wildcard]
see \-\-xhtml

.TP
.B \-\-by\-*
see \-\-output\-by\-*

.TP
.B \-C
configure/initialise shared output directory files initialize shared output
directory (config files such as css and dtd files are not updated if they
already exist unless modifier is used). \-C \-\-init\-site configure/initialise
site more extensive than \-C on its own, shared output directory files/force
update, existing shared output config files such as css and dtd files are
updated if this modifier is used.

.TP
.B \-CC
see \-\-configure

.TP
.B \-c [filename/wildcard]
see \-\-color\-toggle

.TP
.B \-\-color\-toggle [filename/wildcard]
screen toggle ansi screen colour on or off depending on default set (unless \-c
flag is used: if sisurc colour default is set to 'true', output to screen will
be with colour, if sisurc colour default is set to 'false' or is undefined
screen output will be without colour). Alias \-c

.TP
.B \-\-configure
configure/initialise shared output directory files initialize shared output
directory (config files such as css and dtd files are not updated if they
already exist unless modifier is used). The equivalent of: \-C \-\-init\-site
configure/initialise site, more extensive than \-C on its own, shared output
directory files/force update, existing shared output config files such as css
and dtd files are updated if \-CC is used.

.TP
.B \-\-concordance [filename/wildcard]
produces concordance (wordmap) a rudimentary index of all the words in a
document. (Concordance files are not generated for documents of over 260,000
words unless this limit is increased in the file sisurc.yml). Alias \-w

.TP
.B \-D [instruction] [filename]
see \-\-pg

.TP
.B \-d [\-\-db\-[database \ type \ (sqlite|pg)]] \-\-[instruction] [filename]
see \-\-sqlite

.TP
.B \-\-dal [filename/wildcard/url]
assumed for most other flags, creates new intermediate files for processing
(document abstraction) that is used in all subsequent processing of other
output. This step is assumed for most processing flags. To skip it see \-n.
Alias \-m

.TP
.B \-\-delete [filename/wildcard]
see \-\-zap

.TP
.B \-\-dump[=directory_path] [filename/wildcard]
places output in directory specified, if none is specified in the current
directory (pwd). Compare \-\-redirect

.TP
.B \-e [filename/wildcard]
see \-\-epub

.TP
.B \-\-epub [filename/wildcard]
produces an epub document, [sisu \ version \ >=2 \ ] (filename.epub). Alias \-e

.TP
.B \-\-exc\-*
exclude output feature, overrides configuration settings \-\-exc\-
.I ocn,
(exclude
.I object citation numbering,
(switches off
.I object citation numbering
) , affects html (seg, scroll), epub, xhtml, xml, pdf) ; \-\-exc\-toc, (exclude
table of contents, affects html (scroll), epub, pdf) ;
\-\-exc\-links\-to\-manifest, \-\-exc\-manifest\-links, (exclude links to
manifest, affects html (seg, scroll)); \-\-exc\-search\-form, (exclude search
form, affects html (seg, scroll), manifest); \-\-exc\-minitoc, (exclude mini
table of contents, affects html (seg), concordance, manifest);
\-\-exc\-manifest\-minitoc, (exclude mini table of contents, affects manifest);
\-\-exc\-html\-minitoc, (exclude mini table of contents, affects html (seg),
concordance); \-\-exc\-html\-navigation, (exclude navigation, affects html
(seg)); \-\-exc\-html\-navigation\-bar, (exclude navigation bar, affects html
(seg)); \-\-exc\-html\-search\-form, (exclude search form, affects html (seg,
scroll)); \-\-exc\-html\-right\-pane, (exclude right pane/column, affects html
(seg, scroll)); \-\-exc\-html\-top\-band, (exclude top band, affects html (seg,
scroll), concordance (minitoc forced on to provide seg navigation));
\-\-exc\-segsubtoc (exclude sub table of contents, affects html (seg), epub) ;
see also \-\-inc\-*

.TP
.B \-F [\-\-webserv=webrick]
see \-\-sample\-search\-form

.TP
.B \-f [optional \ string \ part \ of \ filename]
see \-\-find

.TP
.B \-\-find [optional \ string \ part \ of \ filename]
without match string, glob all \.sst \.ssm files in directory (including
language subdirectories). With match string, find files that match given string
in directory (including language subdirectories). Alias \-f, \-\-glob, \-G

.TP
.B \-G [optional \ string \ part \ of \ filename]
see \-\-find

.TP
.B \-g [filename/wildcard]
see \-\-git

.TP
.B \-\-git [filename/wildcard]
produces or updates markup source file structure in a git repo (experimental
and subject to change). Alias \-g

.TP
.B \-\-glob [optional \ string \ part \ of \ filename]
see \-\-find

.TP
.B \-h [filename/wildcard]
see \-\-html

.TP
.B \-\-harvest *.ss[tm]
makes two lists of sisu output based on the sisu markup documents in a
directory: list of author and authors works (year and titles), and; list by
topic with titles and author. Makes use of header metadata fields (author,
title, date, topic_register). Can be used with maintenance (\-M) and remote
placement (\-R) flags.

.TP
.B \-\-help [topic]
provides help on the selected topic, where topics (keywords) include: list,
(com)mands, short(cuts), (mod)ifiers, (env)ironment, markup, syntax, headers,
headings, endnotes, tables, example, customise, skin, (dir)ectories, path,
(lang)uage, db, install, setup, (conf)igure, convert, termsheet, search, sql,
features, license.

.TP
.B \-\-html [filename/wildcard]
produces html output, segmented text with table of contents (toc.html and
index.html) and the document in a single file (scroll.html). Alias \-h

.TP
.B \-I [filename/wildcard]
see \-\-texinfo

.TP
.B \-i [filename/wildcard]
see \-\-manpage

.TP
.B \-\-inc\-*
include output feature, overrides configuration settings, (usually the default
if none set), has precedence over \-\-exc\-* (exclude output feature). Some
detail provided under \-\-exc\-*, see \-\-exc\-*

.TP
.B \-j [filename/wildcard]
copies images associated with a file for use by html, xhtml & xml outputs
(automatically invoked by \-\-dump & redirect).

.TP
.B \-\-keep\-processing\-files [filename/wildcard/url]
see \-\-maintenance

.TP
.B \-L
prints license information.

.TP
.B \-M [filename/wildcard/url]
see \-\-maintenance

.TP
.B \-m [filename/wildcard/url]
see \-\-dal (document abstraction level/layer)

.TP
.B \-\-machine [filename/wildcard/url]
see \-\-dal (document abstraction level/layer)

.TP
.B \-\-maintenance [filename/wildcard/url]
maintenance mode, interim processing files are preserved and their locations
indicated. (also see \-V). Aliases \-M and \-\-keep\-processing\-files.

.TP
.B \-\-manpage [filename/wildcard]
produces man page of file, not suitable for all outputs. Alias \-i

.TP
.B \-N [filename/wildcard/url]
document digest or document content certificate ( DCC ) as md5 digest tree of
the document: the digest for the document, and digests for each object
contained within the document (together with information on software versions
that produced it) (digest.txt). \-NV for verbose digest output to screen.

.TP
.B \-n [filename/wildcard/url]
skip the creation of intermediate processing files (document abstraction) if
they already exist, this skips the equivalent of \-m which is otherwise assumed
by most processing flags.

.TP
.B \-\-no\-*
see \-\-exc\-*

.TP
.B \-o [filename/wildcard/url]
see \-\-odt

.TP
.B \-\-odf [filename/wildcard/url]
see \-\-odt

.TP
.B \-\-odt [filename/wildcard/url]
output basic document in opendocument file format (opendocument.odt). Alias \-o

.TP
.B \-\-output\-by\-*
select output directory structure from 3 alternatives:
\-\-output\-by\-language, (language directory (based on language code) with
filetype (html, epub, pdf etc.) subdirectories); \-\-output\-by\-filetype,
(filetype directories with language code as part of filename);
\-\-output\-by\-filename, (filename directories with language code as part of
filename). This is configurable. Alias \-\-by\-*

.TP
.B \-P [language_directory/filename \ language_directory]
see \-\-po4a

.TP
.B \-p [filename/wildcard]
see \-\-pdf

.TP
.B \-\-pdf [filename/wildcard]
produces
.I LaTeX
pdf (portrait.pdf & landscape.pdf). Default paper size is set in config file,
or document header, or provided with additional command line parameter, e.g.
\-\-papersize\-a4 preset sizes include: 'A4', U.S. 'letter' and 'legal' and
book sizes 'A5' and 'B5' (system defaults to A4). Alias \-p

.TP
.B \-\-pg [instruction] [filename]
database
.I PostgreSQL
( \-\-pgsql may be used instead) possible instructions, include: \-\-createdb;
\-\-create; \-\-dropall; \-\-import [filename]; \-\-update [filename];
\-\-remove [filename]; see database section below. Alias \-D

.TP
.B \-\-po [language_directory/filename \ language_directory]
see \-\-po4a

.TP
.B \-\-po4a [language_directory/filename \ language_directory]
produces \.pot and po files for the file in the languages specified by the
language directory.
.B SiSU
markup is placed in subdirectories named with the language code, e.g. en/ fr/
es/. The sisu config file must set the output directory structure to
multilingual. v3, experimental

.TP
.B \-Q [filename/wildcard]
see \-\-qrcode

.TP
.B \-q [filename/wildcard]
see \-\-quiet

.TP
.B \-\-qrcode [filename/wildcard]
generate QR code image of metadata (used in manifest). v3 only.

.TP
.B \-\-quiet [filename/wildcard]
quiet less output to screen.

.TP
.B \-R [filename/wildcard]
see \-\-rsync

.TP
.B \-r [filename/wildcard]
see \-\-scp

.TP
.B \-\-redirect[=directory_path] [filename/wildcard]
places output in subdirectory under specified directory, subdirectory uses the
filename (without the suffix). If no output directory is specified places the
subdirectory under the current directory (pwd). Compare \-\-dump

.TP
.B \-\-rsync [filename/wildcard]
copies sisu output files to remote host using rsync. This requires that
sisurc.yml has been provided with information on hostname and username, and
that you have your "keys" and ssh agent in place. Note the behavior of rsync
different if \-R is used with other flags from if used alone. Alone the rsync
\-\-delete parameter is sent, useful for cleaning the remote directory (when
\-R is used together with other flags, it is not). Also see \-\-scp. Alias \-R

.TP
.B \-S
see \-\-sisupod

.TP
.B \-S [filename/wildcard]
see \-\-sisupod

.TP
.B \-s [filename/wildcard]
see \-\-source

.TP
.B \-\-sample\-search\-form [\-\-webserv=webrick]
generate examples of (naive) cgi search form for
.I SQLite
and PgSQL depends on your already having used sisu to populate an
.I SQLite
and/or PgSQL database, (the
.I SQLite
version scans the output directories for existing sisu_sqlite databases, so it
is first necessary to create them, before generating the search form) see \-d
\-D and the database section below. If the optional parameter
\-\-webserv=webrick is passed, the cgi examples created will be set up to use
the default port set for use by the webrick server, (otherwise the port is left
blank and the system setting used, usually 80). The samples are dumped in the
present work directory which must be writable, (with screen instructions given
that they be copied to the cgi\-bin directory). Alias \-F

.TP
.B \-\-scp [filename/wildcard]
copies sisu output files to remote host using scp. This requires that
sisurc.yml has been provided with information on hostname and username, and
that you have your "keys" and ssh agent in place. Also see \-\-rsync. Alias \-r

.TP
.B \-\-sqlite \-\-[instruction] [filename]
database type set to
.I SQLite,
this produces one of two possible databases, without additional database
related instructions it produces a discreet
.I SQLite
file for the document processed; with additional instructions it produces a
common
.I SQLite
database of all processed documents that (come from the same document
preparation directory and as a result) share the same output directory base
path (possible instructions include: \-\-createdb; \-\-create; \-\-dropall;
\-\-import [filename]; \-\-update [filename]; \-\-remove [filename]); see
database section below. Alias \-d

.TP
.B \-\-sisupod
produces a sisupod a zipped sisu directory of markup files including sisu
markup source files and the directories local configuration file, images and
skins. Note: this only includes the configuration files or skins contained in
 \./_sisu not those in ~/.sisu \-S [filename/wildcard] option. Note: (this
option is tested only with zsh). Alias \-S

.TP
.B \-\-sisupod [filename/wildcard]
produces a zipped file of the prepared document specified along with associated
images, by default named sisupod.zip they may alternatively be named with the
filename extension \.ssp This provides a quick way of gathering the relevant
parts of a sisu document which can then for example be emailed. A sisupod
includes sisu markup source file, (along with associated documents if a master
file, or available in multilingual versions), together with related images and
skin.
.B SiSU
commands can be run directly against a sisupod contained in a local directory,
or provided as a url on a remote site. As there is a security issue with skins
provided by other users, they are not applied unless the flag \-\-trust or
\-\-trusted is added to the command instruction, it is recommended that file
that are not your own are treated as untrusted. The directory structure of the
unzipped file is understood by sisu, and sisu commands can be run within it.
Note: if you wish to send multiple files, it quickly becomes more space
efficient to zip the sisu markup directory, rather than the individual files
for sending). See the \-S option without [filename/wildcard]. Alias \-S

.TP
.B \-\-source [filename/wildcard]
copies sisu markup file to output directory. Alias \-s

.TP
.B \-T [filename/wildcard \ (*.termsheet.rb)]
standard form document builder, preprocessing feature

.TP
.B \-t [filename/wildcard]
see \-\-txt

.TP
.B \-\-texinfo [filename/wildcard]
produces texinfo and info file, (view with pinfo). Alias \-I

.TP
.B \-\-txt [filename/wildcard]
produces
.I plaintext
with Unix linefeeds and without markup, (object numbers are omitted), has
footnotes at end of each paragraph that contains them [ \ \-A \ for \
equivalent \ dos \ (linefeed) \ output \ file] [see \ \-e \ for \ endnotes].
(Options include: \-\-endnotes for endnotes \-\-footnotes for footnotes at the
end of each paragraph \-\-unix for unix linefeed (default) \-\-msdos for msdos
linefeed). Alias \-t

.TP
.B \-U [filename/wildcard]
see \-\-urls

.TP
.B \-u [filename/wildcard]
provides url mapping of output files for the flags requested for processing,
also see \-U

.TP
.B \-\-urls [filename/wildcard]
prints url output list/map for the available processing flags options and
resulting files that could be requested, (can be used to get a list of
processing options in relation to a file, together with information on the
output that would be produced), \-u provides url output mapping for those flags
requested for processing. The default assumes sisu_webrick is running and
provides webrick url mappings where appropriate, but these can be switched to
file system paths in sisurc.yml. Alias \-U

.TP
.B \-V
on its own, provides
.B SiSU
version and environment information (sisu \-\-help env)

.TP
.B \-V [filename/wildcard]
even more verbose than the \-v flag.

.TP
.B \-v
on its own, provides
.B SiSU
version information

.TP
.B \-v [filename/wildcard]
see \-\-verbose

.TP
.B \-\-v3 [filename/wildcard]
invokes the sisu v3 document parser/generator. You may run sisu3 instead.

.TP
.B \-\-v4 [filename/wildcard]
invokes the sisu v4 document parser/generator. This is the default and is
normally omitted.

.TP
.B \-\-verbose [filename/wildcard]
provides verbose output of what is being generated, where output is placed (and
error messages if any), as with \-u flag provides a url mapping of files
created for each of the processing flag requests. Alias \-v

.TP
.B \-W
see \-\-webrick

.TP
.B \-w [filename/wildcard]
see \-\-concordance

.TP
.B \-\-webrick
starts ruby' s webrick webserver points at sisu output directories, the default
port is set to 8081 and can be changed in the resource configuration files.
[tip: \ the \ webrick \ server \ requires \ link \ suffixes, \ so \ html \
output \ should \ be \ created \ using \ the \ \-h \ option \ rather \ than \
\-H \ ; \ also, \ note \ \-F \ webrick \ ]. Alias \-W

.TP
.B \-\-wordmap [filename/wildcard]
see \-\-concordance

.TP
.B \-\-xhtml [filename/wildcard]
produces xhtml/
.I XML
output for browser viewing (sax parsing). Alias \-b

.TP
.B \-\-xml\-dom [filename/wildcard]
produces
.I XML
output with deep document structure, in the nature of dom. Alias \-X

.TP
.B \-\-xml\-sax [filename/wildcard]
produces
.I XML
output shallow structure (sax parsing). Alias \-x

.TP
.B \-X [filename/wildcard]
see \-\-xml\-dom

.TP
.B \-x [filename/wildcard]
see \-\-xml\-sax

.TP
.B \-Y [filename/wildcard]
produces a short sitemap entry for the document, based on html output and the
sisu_manifest. \-\-sitemaps generates/updates the sitemap index of existing
sitemaps. (Experimental, [g,y,m \ announcement \ this \ week])

.TP
.B \-y [filename/wildcard]
produces an html summary of output generated (hyperlinked to content) and
document specific metadata (sisu_manifest.html). This step is assumed for most
processing flags.

.TP
.B \-Z [filename/wildcard]
see \-\-zap

.TP
.B \-\-zap [filename/wildcard]
Zap, if used with other processing flags deletes output files of the type about
to be processed, prior to processing. If \-Z is used as the lone processing
related flag (or in conjunction with a combination of \-[mMvVq]), will remove
the related document output directory. Alias \-Z

.SH COMMAND LINE MODIFIERS
.br

.TP
.B \-\-no\-
.I ocn
[with \ \-\-html \ \-\-pdf \ or \ \-\-epub] switches off
.I object citation numbering.
Produce output without identifying numbers in margins of html or
.I LaTeX
/pdf output.

.TP
.B \-\-no\-annotate
strips output text of editor endnotes[^*1] denoted by asterisk or dagger/plus
sign

.TP
.B \-\-no\-asterisk
strips output text of editor endnotes[^*2] denoted by asterisk sign

.TP
.B \-\-no\-dagger
strips output text of editor endnotes[^+1] denoted by dagger/plus sign

.SH DATABASE COMMANDS
.br

.br
.B dbi \- database interface

.br
.B \-D or \-\-pgsql
set for
.I PostgreSQL
.B \-d or \-\-sqlite
default set for
.I SQLite
\-d is modifiable with \-\-db=[database \ type \ (PgSQL \ or \ .I \ SQLite \ )
\ ]

.TP
.B \-\-pg \-v \-\-createall
initial step, creates required relations (tables, indexes) in existing
.I PostgreSQL
database (a database should be created manually and given the same name as
working directory, as requested) (rb.dbi) [ \ \-dv \ \-\-createall \ .I \
SQLite \ equivalent] it may be necessary to run sisu \-Dv \-\-createdb
initially NOTE: at the present time for
.I PostgreSQL
it may be necessary to manually create the database. The command would be
'createdb [database \ name]' where database name would be SiSU_[present \
working \ directory \ name \ (without \ path)]. Please use only alphanumerics
and underscores.

.TP
.B \-\-pg \-v \-\-import
[filename/wildcard] imports data specified to
.I PostgreSQL
db (rb.dbi) [ \ \-dv \ \-\-import \ .I \ SQLite \ equivalent]

.TP
.B \-\-pg \-v \-\-update
[filename/wildcard] updates/imports specified data to
.I PostgreSQL
db (rb.dbi) [ \ \-dv \ \-\-update \ .I \ SQLite \ equivalent]

.TP
.B \-\-pg \-\-remove
[filename/wildcard] removes specified data to
.I PostgreSQL
db (rb.dbi) [ \ \-d \ \-\-remove \ .I \ SQLite \ equivalent]

.TP
.B \-\-pg \-\-dropall
kills data" and drops (
.I PostgreSQL
or
.I SQLite
) db, tables & indexes [ \ \-d \ \-\-dropall \ .I \ SQLite \ equivalent]

.br
The \-v is for verbose output.

.SH SHORTCUTS, SHORTHAND FOR MULTIPLE FLAGS
.br

.TP
.B \-\-update [filename/wildcard]
Checks existing file output and runs the flags required to update this output.
This means that if only html and pdf output was requested on previous runs,
only the \-hp files will be applied, and only these will be generated this
time, together with the summary. This can be very convenient, if you offer
different outputs of different files, and just want to do the same again.

.TP
.B \-0 to \-5 [filename \ or \ wildcard]
Default shorthand mappings (for v3, note that the defaults can be
changed/configured in the sisurc.yml file):

.TP
.B \-0
\-NQhewpotbxXyYv [this \ is \ the \ default \ action \ run \ when \ no \
options \ are \ give, \ i.e. \ on \ 'sisu \ [filename]']

.TP
.B \-1
\-Qhewpoty

.TP
.B \-2
\-NQhewpotbxXy

.TP
.B \-3
\-NQhewpotbxXyY

.TP
.B \-4
\-NQhewpotbxXDyY \-\-update

.TP
.B \-5
\-NQhewpotbxXDyYv \-\-update

.br
add \-v for verbose mode and \-c to toggle color state, e.g. sisu \-2vc
[filename \ or \ wildcard]

.br
consider \-u for appended url info or \-v for verbose output

.SH COMMAND LINE WITH FLAGS \- BATCH PROCESSING

.br
In the data directory run sisu \-mh filename or wildcard eg. "sisu \-h
cisg.sst" or "sisu \-h *.{sst,ssm}" to produce html version of all documents.

.br
Running sisu (alone without any flags, filenames or wildcards) brings up the
interactive help, as does any sisu command that is not recognised. Enter to
escape.

.SH HELP
.br

.SH SISU MANUAL

.br
The most up to date information on sisu should be contained in the sisu_manual,
available at:

.br
  <http://sisudoc.org/sisu/sisu_manual/>

.br
The manual can be generated from source, found respectively, either within the
.B SiSU
tarball or installed locally at:

.br
  ./data/doc/sisu/markup\-samples/sisu_manual

.br
  /usr/share/doc/sisu/markup\-samples/sisu_manual

.br
move to the respective directory and type e.g.:

.br
  sisu sisu_manual.ssm

.SH SISU MAN PAGES

.br
If
.B SiSU
is installed on your system usual man commands should be available, try:

.br
  man sisu

.br
Most
.B SiSU
man pages are generated directly from sisu documents that are used to prepare
the sisu manual, the sources files for which are located within the
.B SiSU
tarball at:

.br
  ./data/doc/sisu/markup\-samples/sisu_manual

.br
Once installed, directory equivalent to:

.br
  /usr/share/doc/sisu/markup\-samples/sisu_manual

.br
Available man pages are converted back to html using man2html:

.br
  /usr/share/doc/sisu/html/

.br
  ./data/doc/sisu/html

.br
An online version of the sisu man page is available here:

.br
* various sisu man pages <http://www.jus.uio.no/sisu/man/> [^9]

.br
* sisu.1 <http://www.jus.uio.no/sisu/man/sisu.1.html> [^10]

.SH SISU BUILT\-IN INTERACTIVE HELP

.br
This is particularly useful for getting the current sisu setup/environment
information:

.br
  sisu \-\-help

.br
  sisu \-\-help [subject]

.br
    sisu \-\-help commands

.br
    sisu \-\-help markup

.br
    sisu \-\-help env [for \ feedback \ on \ the \ way \ your \ system \ is \
    setup \ with \ regard \ to \ sisu \ ]

.br
  sisu \-V [environment \ information, \ same \ as \ above \ command]

.br
  sisu (on its own provides version and some help information)

.br
Apart from real\-time information on your current configuration the
.B SiSU
manual and man pages are likely to contain more up\-to\-date information than
the sisu interactive help (for example on commands and markup).

.br
NOTE: Running the command sisu (alone without any flags, filenames or
wildcards) brings up the interactive help, as does any sisu command that is not
recognised. Enter to escape.

.SH INTRODUCTION TO SISU MARKUP[^11]
.br

.SH SUMMARY

.br
.B SiSU
source documents are
.I plaintext
(
.I UTF\-8
)[^12] files

.br
All paragraphs are separated by an empty line.

.br
Markup is comprised of:

.br
* at the top of a document, the document header made up of semantic meta\-data
about the document and if desired additional processing instructions (such an
instruction to automatically number headings from a particular level down)

.br
* followed by the prepared substantive text of which the most important single
characteristic is the markup of different heading levels, which define the
primary outline of the document structure. Markup of substantive text includes:

.br
  * heading levels defines document structure

.br
  * text basic attributes, italics, bold etc.

.br
  * grouped text (objects), which are to be treated differently, such as code
  blocks or poems.

.br
  * footnotes/endnotes

.br
  * linked text and images

.br
  * paragraph actions, such as indent, bulleted, numbered\-lists, etc.

.br
Some interactive help on markup is available, by typing sisu and selecting
markup or sisu \-\-help markup

.br
To check the markup in a file:

.br
  sisu \-\-identify [filename].sst

.br
For brief descriptive summary of markup history

.br
  sisu \-\-query\-history

.br
or if for a particular version:

.br
  sisu \-\-query\-0.38

.SH MARKUP EXAMPLES

.SH ONLINE

.br
Online markup examples are available together with the respective outputs
produced from <http://www.jus.uio.no/sisu/SiSU/examples.html> or from
<http://www.jus.uio.no/sisu/sisu_examples/>

.br
There is of course this document, which provides a cursory overview of sisu
markup and the respective output produced:
<http://www.jus.uio.no/sisu/sisu_markup/>

.br
an alternative presentation of markup syntax:
/usr/share/doc/sisu/on_markup.txt.gz

.SH INSTALLED

.br
With
.B SiSU
installed sample skins may be found in: /usr/share/doc/sisu/markup\-samples (or
equivalent directory) and if sisu \-markup\-samples is installed also under:
/usr/share/doc/sisu/markup\-samples\-non\-free

.SH MARKUP OF HEADERS
.br

.br
Headers contain either: semantic meta\-data about a document, which can be used
by any output module of the program, or; processing instructions.

.br
Note: the first line of a document may include information on the markup
version used in the form of a comment. Comments are a percentage mark at the
start of a paragraph (and as the first character in a line of text) followed by
a space and the comment:

.nf
% this would be a comment
.fi

.SH SAMPLE HEADER

.br
This current document is loaded by a master document that has a header similar
to this one:

.nf
% SiSU master 2.0
@title: SiSU
:subtitle: Manual
@creator:
:author: Amissah, Ralph
@publisher: [publisher \ name]
@rights: Copyright (C) Ralph Amissah 2007, part of SiSU documentation, License GPL 3
@classify:
:type: information
:topic_register: SiSU:manual;electronic documents:SiSU:manual
:subject: ebook, epublishing, electronic book, electronic publishing,
    electronic document, electronic citation, data structure,
     citation systems, search
% used_by: manual
@date:
:published: 2008\-05\-22
:created: 2002\-08\-28
:issued: 2002\-08\-28
:available: 2002\-08\-28
:modified: 2010\-03\-03
@make:
:num_top: 1
:breaks: new=C; break=1
:bold: /Gnu|Debian|Ruby|SiSU/
:home_button_text: {SiSU}http://sisudoc.org; {git}http://git.sisudoc.org
:footer: {SiSU}http://sisudoc.org; {git}http://git.sisudoc.org
:manpage: name=sisu \- documents: markup, structuring, publishing in multiple standard formats, and search;
     synopsis=sisu [\-abcDdeFhIiMmNnopqRrSsTtUuVvwXxYyZz0\-9] [filename/wildcard \ ]
     . sisu [\-Ddcv] [instruction]
     . sisu [\-CcFLSVvW]
     . sisu \-\-v4 [operations]
     . sisu \-\-v3 [operations]
@links:
{ SiSU Homepage }http://www.sisudoc.org/
{ SiSU Manual }http://www.sisudoc.org/sisu/sisu_manual/
{ Book Samples & Markup Examples }http://www.jus.uio.no/sisu/SiSU/examples.html
{ SiSU Download }http://www.jus.uio.no/sisu/SiSU/download.html
{ SiSU Changelog }http://www.jus.uio.no/sisu/SiSU/changelog.html
{ SiSU Git repo }http://git.sisudoc.org/?p=code/sisu.git;a=summary
{ SiSU List Archives }http://lists.sisudoc.org/pipermail/sisu/
{ SiSU @ Debian }http://packages.qa.debian.org/s/sisu.html
{ SiSU Project @ Debian }http://qa.debian.org/developer.php?login=sisu@lists.sisudoc.org
{ SiSU @ Wikipedia }http://en.wikipedia.org/wiki/SiSU
.fi

.SH AVAILABLE HEADERS

.br
Header tags appear at the beginning of a document and provide meta information
on the document (such as the
.I Dublin Core
) , or information as to how the document as a whole is to be processed. All
header instructions take the form @headername: or on the next line and indented
by once space :subheadername: All
.I Dublin Core
meta tags are available

.br
.B @indentifier:
information or instructions

.br
where the "identifier" is a tag recognised by the program, and the
"information" or "instructions" belong to the tag/indentifier specified

.br
Note: a header where used should only be used once; all headers apart from
@title: are optional; the @structure: header is used to describe document
structure, and can be useful to know.

.br
This is a sample header

.nf
% SiSU 2.0 [declared \ file\-type \ identifier \ with \ markup \ version]
.fi

.nf
@title: [title \ text] [this \ header \ is \ the \ only \ one \ that \ is \ mandatory]
  :subtitle: [subtitle \ if \ any]
  :language: English
.fi

.nf
@creator:
:author: [Lastname, \ First \ names]
:illustrator: [Lastname, \ First \ names]
:translator: [Lastname, \ First \ names]
:prepared_by: [Lastname, \ First \ names]
.fi

.nf
@date:
:published: [year \ or \ yyyy\-mm\-dd]
:created: [year \ or \ yyyy\-mm\-dd]
:issued: [year \ or \ yyyy\-mm\-dd]
:available: [year \ or \ yyyy\-mm\-dd]
:modified: [year \ or \ yyyy\-mm\-dd]
:valid: [year \ or \ yyyy\-mm\-dd]
:added_to_site: [year \ or \ yyyy\-mm\-dd]
:translated: [year \ or \ yyyy\-mm\-dd]
.fi

.nf
@rights:
:copyright: Copyright (C) [Year \ and \ Holder]
:license: [Use \ License \ granted]
:text: [Year \ and \ Holder]
:translation: [Name, \ Year]
:illustrations: [Name, \ Year]
.fi

.nf
@classify:
:topic_register: SiSU:markup sample:book;book:novel:fantasy
:type:
:subject:
:description:
:keywords:
:abstract:
:loc: [Library \ of \ Congress \ classification]
:dewey: Dewey classification
.fi

.nf
@identify:
:isbn: [ISBN]
:oclc:
.fi

.nf
@links: { SiSU }http://www.sisudoc.org
  { FSF }http://www.fsf.org
.fi

.nf
@make:
:num_top: 1
:headings: [text \ to \ match \ for \ each \ level \     (e.g. \ PART; \ Chapter; \ Section; \ Article; \ or \ another: \ none; \ BOOK|FIRST|SECOND; \ none; \ CHAPTER;) \ :breaks: \ new=:C; \ break=1 \ :promo: \ sisu, \ ruby, \ sisu_search_libre, \ open_society \ :bold: \ [regular \ expression \ of \ words/phrases \ to \ be \ made \ bold]
:italics: [regular \ expression \ of \ words/phrases \ to \ italicise]
:home_button_text: {SiSU}http://sisudoc.org; {git}http://git.sisudoc.org
:footer: {SiSU}http://sisudoc.org; {git}http://git.sisudoc.org
.fi

.nf
@original:
:language: [language]
.fi

.nf
@notes:
:comment:
:prefix: [prefix \ is \ placed \ just \ after \ table \ of \ contents]
.fi

.SH MARKUP OF SUBSTANTIVE TEXT
.br

.SH HEADING LEVELS

.br
Heading levels are :A~ ,:B~ ,:C~ ,1~ ,2~ ,3~ \... :A \- :C being part / section
headings, followed by other heading levels, and 1 \-6 being headings followed
by substantive text or sub\-headings. :A~ usually the title :A~? conditional
level 1 heading (used where a stand\-alone document may be imported into
another)

.br
.B :A~ [heading \ text]
Top level heading [this \ usually \ has \ similar \ content \ to \ the \ title
\ @title: \ ] NOTE: the heading levels described here are in 0.38 notation, see
heading

.br
.B :B~ [heading \ text]
Second level heading [this \ is \ a \ heading \ level \ divider]

.br
.B :C~ [heading \ text]
Third level heading [this \ is \ a \ heading \ level \ divider]

.br
.B 1~ [heading \ text]
Top level heading preceding substantive text of document or sub\-heading 2, the
heading level that would normally be marked 1. or 2. or 3. etc. in a document,
and the level on which sisu by default would break html output into named
segments, names are provided automatically if none are given (a number),
otherwise takes the form 1~my_filename_for_this_segment

.br
.B 2~ [heading \ text]
Second level heading preceding substantive text of document or sub\-heading 3 ,
the heading level that would normally be marked 1.1 or 1.2 or 1.3 or 2.1 etc.
in a document.

.br
.B 3~ [heading \ text]
Third level heading preceding substantive text of document, that would normally
be marked 1.1.1 or 1.1.2 or 1.2.1 or 2.1.1 etc. in a document

.nf
1~filename level 1 heading,
% the primary division such as Chapter that is followed by substantive text, and may be further subdivided (this is the level on which by default html segments are made)
.fi

.SH FONT ATTRIBUTES

.br
.B markup example:

.nf
normal text,  *{emphasis}*, !{bold text}!, /{italics}/, _{underscore}_, "{citation}",
^{superscript}^, ,{subscript},, +{inserted text}+, \-{strikethrough}\-, #{monospace}#
normal text
*{emphasis}* [note: \ can \ be \ configured \ to \ be \ represented \ by \ bold, \ italics \ or \ underscore]
!{bold text}!
/{italics}/
_{underscore}_
"{citation}"
^{superscript}^
,{subscript},
+{inserted text}+
\-{strikethrough}\-
#{monospace}#
.fi

.br
.B resulting output:

.br
normal text,
.B emphasis,
.B bold text
,
.I italics,
.I underscore,
"citation", ^superscript^, [subscript], ++inserted text++,
\-\-strikethrough\-\-, monospace

.br
normal text

.br
.B emphasis
[note: \ can \ be \ configured \ to \ be \ represented \ by \ bold, \ italics \
or \ underscore]

.br
.B bold text

.br
.I italics

.br
.I underscore

.br
"citation"

.br
^superscript^

.br
[subscript]

.br
++inserted text++

.br
\-\-strikethrough\-\-

.br
monospace

.SH INDENTATION AND BULLETS

.br
.B markup example:

.nf
ordinary paragraph
_1 indent paragraph one step
_2 indent paragraph two steps
_9 indent paragraph nine steps
.fi

.br
.B resulting output:

.br
ordinary paragraph

.br
  indent paragraph one step

.br
    indent paragraph two steps

.br
                  indent paragraph nine steps

.br
.B markup example:

.nf
_* bullet text
_1* bullet text, first indent
_2* bullet text, two step indent
.fi

.br
.B resulting output:

.br
* bullet text

.br
  * bullet text, first indent

.br
    * bullet text, two step indent

.br
Numbered List (not to be confused with headings/titles, (document structure))

.br
.B markup example:

.nf
# numbered list                numbered list 1., 2., 3, etc.
_# numbered list numbered list indented a., b., c., d., etc.
.fi

.SH HANGING INDENTS

.br
.B markup example:

.nf
_0_1 first line no indent,
rest of paragraph indented one step
_1_0 first line indented,
rest of paragraph no indent
in each case level may be 0\-9
.fi

.br
.B resulting output:

.br
  first line no indent, rest of paragraph indented one step

.br
first line indented, rest of paragraph no indent

.br
in each case level may be 0\-9

.SH FOOTNOTES / ENDNOTES

.br
Footnotes and endnotes are marked up at the location where they would be
indicated within a text. They are automatically numbered. The output type
determines whether footnotes or endnotes will be produced

.br
.B markup example:

.nf
~{ a footnote or endnote }~
.fi

.br
.B resulting output:

.br
[^13]

.br
.B markup example:

.nf
normal text~{ self contained endnote marker & endnote in one }~ continues
.fi

.br
.B resulting output:

.br
normal text[^14] continues

.br
.B markup example:

.nf
normal text ~{* unnumbered asterisk footnote/endnote, insert multiple asterisks if required }~ continues
normal text ~{** another unnumbered asterisk footnote/endnote }~ continues
.fi

.br
.B resulting output:

.br
normal text [^*] continues

.br
normal text [^**] continues

.br
.B markup example:

.nf
normal text ~[* \ editors \ notes, \ numbered \ asterisk \ footnote/endnote \ series \ ]~ continues
normal text ~[+ \ editors \ notes, \ numbered \ asterisk \ footnote/endnote \ series \ ]~ continues
.fi

.br
.B resulting output:

.br
normal text [^*3] continues

.br
normal text [^+2] continues

.br
.B Alternative endnote pair notation for footnotes/endnotes:

.nf
% note the endnote marker "~^"
normal text~^ continues
^~ endnote text following the paragraph in which the marker occurs
.fi

.br
the standard and pair notation cannot be mixed in the same document

.SH LINKS

.SH NAKED URLS WITHIN TEXT, DEALING WITH URLS

.br
urls found within text are marked up automatically. A url within text is
automatically hyperlinked to itself and by default decorated with angled
braces, unless they are contained within a code block (in which case they are
passed as normal text), or escaped by a preceding underscore (in which case the
decoration is omitted).

.br
.B markup example:

.nf
normal text http://www.sisudoc.org/ continues
.fi

.br
.B resulting output:

.br
normal text <http://www.sisudoc.org/> continues

.br
An escaped url without decoration

.br
.B markup example:

.nf
normal text _http://www.sisudoc.org/ continues
deb _http://www.jus.uio.no/sisu/archive unstable main non\-free
.fi

.br
.B resulting output:

.br
normal text <_http://www.sisudoc.org/> continues

.br
deb <_http://www.jus.uio.no/sisu/archive> unstable main non\-free

.br
where a code block is used there is neither decoration nor hyperlinking, code
blocks are discussed later in this document

.br
.B resulting output:

.nf
deb http://www.jus.uio.no/sisu/archive unstable main non\-free
deb\-src http://www.jus.uio.no/sisu/archive unstable main non\-free
.fi

.SH LINKING TEXT

.br
To link text or an image to a url the markup is as follows

.br
.B markup example:

.nf
about { SiSU }http://url.org markup
.fi

.br
.B resulting output:

.br
aboutSiSU <http://www.sisudoc.org/> markup

.br
A shortcut notation is available so the url link may also be provided
automatically as a footnote

.br
.B markup example:

.nf
about {~^ SiSU }http://url.org markup
.fi

.br
.B resulting output:

.br
aboutSiSU <http://www.sisudoc.org/> [^15] markup

.br
Internal document links to a tagged location, including an
.I ocn

.br
.B markup example:

.nf
about { text links }#link_text
.fi

.br
.B resulting output:

.br
about ⌠text links⌡⌈link_text⌋

.br
Shared document collection link

.br
.B markup example:

.nf
about { SiSU book markup examples }:SiSU/examples.html
.fi

.br
.B resulting output:

.br
about ⌠
.B SiSU
book markup examples⌡⌈:SiSU/examples.html⌋

.SH LINKING IMAGES

.br
.B markup example:

.nf
{ tux.png 64x80 }image
% various url linked images
{tux.png 64x80 "a better way" }http://www.sisudoc.org/
{GnuDebianLinuxRubyBetterWay.png 100x101 "Way Better \- with Gnu/Linux, Debian and Ruby" }http://www.sisudoc.org/
{~^ ruby_logo.png "Ruby" }http://www.ruby\-lang.org/en/
.fi

.br
.B resulting output:

.br
[ tux.png ]

.br
tux.png 64x80 "Gnu/Linux \- a better way" <http://www.sisudoc.org/>

.br
GnuDebianLinuxRubyBetterWay.png 100x101 "Way Better \- with Gnu/Linux, Debian
and Ruby" <http://www.sisudoc.org/>

.br
ruby_logo.png 70x90 "Ruby" <http://www.ruby\-lang.org/en/> [^16]

.br
.B linked url footnote shortcut

.nf
{~^ [text \ to \ link] }http://url.org
% maps to: { [text \ to \ link] }http://url.org ~{ http://url.org }~
% which produces hyper\-linked text within a document/paragraph, with an endnote providing the url for the text location used in the hyperlink
.fi

.nf
text marker *~name
.fi

.br
note at a heading level the same is automatically achieved by providing names
to headings 1, 2 and 3 i.e. 2~[name] and 3~[name] or in the case of
auto\-heading numbering, without further intervention.

.SH LINK SHORTCUT FOR MULTIPLE VERSIONS OF A SISU DOCUMENT IN THE SAME DIRECTORY
TREE

.br
.B markup example:

.nf
!_ /{"Viral Spiral"}/, David Bollier
{ "Viral Spiral", David Bollier [3sS]}viral_spiral.david_bollier.sst
.fi

.br
.B
.I "Viral Spiral",
David Bollier

"Viral Spiral", David Bollier <http://corundum/sisu_manual/en/manifest/viral_spiral.david_bollier.html>
     document manifest <http://corundum/sisu_manual/en/manifest/viral_spiral.david_bollier.html>
      ⌠html, segmented text⌡「http://corundum/sisu_manual/en/html/viral_spiral.david_bollier.html」
      ⌠html, scroll, document in one⌡「http://corundum/sisu_manual/en/html/viral_spiral.david_bollier.html」
      ⌠epub⌡「http://corundum/sisu_manual/en/epub/viral_spiral.david_bollier.epub」
      ⌠pdf, landscape⌡「http://corundum/sisu_manual/en/pdf/viral_spiral.david_bollier.pdf」
      ⌠pdf, portrait⌡「http://corundum/sisu_manual/en/pdf/viral_spiral.david_bollier.pdf」
      ⌠odf: odt, open document text⌡「http://corundum/sisu_manual/en/odt/viral_spiral.david_bollier.odt」
      ⌠xhtml scroll⌡「http://corundum/sisu_manual/en/xhtml/viral_spiral.david_bollier.xhtml」
      ⌠xml, sax⌡「http://corundum/sisu_manual/en/xml/viral_spiral.david_bollier.xml」
      ⌠xml, dom⌡「http://corundum/sisu_manual/en/xml/viral_spiral.david_bollier.xml」
      ⌠concordance⌡「http://corundum/sisu_manual/en/html/viral_spiral.david_bollier.html」
      ⌠dcc, document content certificate (digests)⌡「http://corundum/sisu_manual/en/digest/viral_spiral.david_bollier.txt」
      ⌠markup source text⌡「http://corundum/sisu_manual/en/src/viral_spiral.david_bollier.sst」
      ⌠markup source (zipped) pod⌡「http://corundum/sisu_manual/en/pod/viral_spiral.david_bollier.sst.zip」

.SH GROUPED TEXT

.SH TABLES

.br
Tables may be prepared in two either of two forms

.br
.B markup example:

.nf
table{ c3; 40; 30; 30;
This is a table
this would become column two of row one
column three of row one is here
And here begins another row
column two of row two
column three of row two, and so on
}table
.fi

.br
.B resulting output:

This is a table|this would become column two of row one|column three of row one is here』And here begins another row|column two of row two|column three of row two, and so on』

.br
a second form may be easier to work with in cases where there is not much
information in each column

.br
.B markup example:
[^18]

.nf
!_ Table 3.1: Contributors to Wikipedia, January 2001 \- June 2005
{table~h 24; 12; 12; 12; 12; 12; 12;}
                                |Jan. 2001|Jan. 2002|Jan. 2003|Jan. 2004|July 2004|June 2006
Contributors*                   |       10|      472|    2,188|    9,653|   25,011|   48,721
Active contributors**           |        9|      212|      846|    3,228|    8,442|   16,945
Very active contributors***     |        0|       31|      190|      692|    1,639|    3,016
No. of English language articles|       25|   16,000|  101,000|  190,000|  320,000|  630,000
No. of articles, all languages  |       25|   19,000|  138,000|  490,000|  862,000|1,600,000
* Contributed at least ten times; ** at least 5 times in last month; *** more than 100 times in last month.
.fi

.br
.B resulting output:

.br
.B Table 3.1: Contributors to Wikipedia, January 2001 \- June 2005

|Jan. 2001|Jan. 2002|Jan. 2003|Jan. 2004|July 2004|June 2006』Contributors*|10|472|2,188|9,653|25,011|48,721』Active contributors**|9|212|846|3,228|8,442|16,945』Very active contributors***|0|31|190|692|1,639|3,016』No. of English language articles|25|16,000|101,000|190,000|320,000|630,000』No. of articles, all languages|25|19,000|138,000|490,000|862,000|1,600,000』

.br
* Contributed at least ten times; ** at least 5 times in last month; *** more
than 100 times in last month.

.SH POEM

.br
.B basic markup:

.nf
poem{
  Your poem here
}poem
Each verse in a poem is given an object number.
.fi

.br
.B markup example:

.nf
poem{
                    `Fury said to a
                   mouse, That he
                 met in the
               house,
            "Let us
              both go to
                law:  I will
                  prosecute
                    YOU.  \-\-Come,
                       I'll take no
                        denial; We
                     must have a
                 trial:  For
              really this
           morning I've
          nothing
         to do."
           Said the
             mouse to the
               cur, "Such
                 a trial,
                   dear Sir,
                         With
                     no jury
                  or judge,
                would be
              wasting
             our
              breath."
               "I'll be
                 judge, I'll
                   be jury,"
                         Said
                    cunning
                      old Fury:
                     "I'll
                      try the
                         whole
                          cause,
                             and
                        condemn
                       you
                      to
                       death."'
}poem
.fi

.br
.B resulting output:

                    `Fury said to a
                   mouse, That he
                 met in the
               house,
            "Let us
              both go to
                law:  I will
                  prosecute
                    YOU.  \-\-Come,
                       I'll take no
                        denial; We
                     must have a
                 trial:  For
              really this
           morning I've
          nothing
         to do."
           Said the
             mouse to the
               cur, "Such
                 a trial,
                   dear Sir,
                         With
                     no jury
                  or judge,
                would be
              wasting
             our
              breath."
               "I'll be
                 judge, I'll
                   be jury,"
                         Said
                    cunning
                      old Fury:
                     "I'll
                      try the
                         whole
                          cause,
                             and
                        condemn
                       you
                      to
                       death."'

.SH GROUP

.br
.B basic markup:

.nf
group{
  Your grouped text here
}group
A group is treated as an object and given a single object number.
.fi

.br
.B markup example:

.nf
group{
                    `Fury said to a
                   mouse, That he
                 met in the
               house,
            "Let us
              both go to
                law:  I will
                  prosecute
                    YOU.  \-\-Come,
                       I'll take no
                        denial; We
                     must have a
                 trial:  For
              really this
           morning I've
          nothing
         to do."
           Said the
             mouse to the
               cur, "Such
                 a trial,
                   dear Sir,
                         With
                     no jury
                  or judge,
                would be
              wasting
             our
              breath."
               "I'll be
                 judge, I'll
                   be jury,"
                         Said
                    cunning
                      old Fury:
                     "I'll
                      try the
                         whole
                          cause,
                             and
                        condemn
                       you
                      to
                       death."'
}group
.fi

.br
.B resulting output:

                    `Fury said to a
                   mouse, That he
                 met in the
               house,
            "Let us
              both go to
                law:  I will
                  prosecute
                    YOU.  \-\-Come,
                       I'll take no
                        denial; We
                     must have a
                 trial:  For
              really this
           morning I've
          nothing
         to do."
           Said the
             mouse to the
               cur, "Such
                 a trial,
                   dear Sir,
                         With
                     no jury
                  or judge,
                would be
              wasting
             our
              breath."
               "I'll be
                 judge, I'll
                   be jury,"
                         Said
                    cunning
                      old Fury:
                     "I'll
                      try the
                         whole
                          cause,
                             and
                        condemn
                       you
                      to
                       death."'

.SH CODE

.br
Code tags code{ \... }code (used as with other group tags described above) are
used to escape regular sisu markup, and have been used extensively within this
document to provide examples of
.B SiSU
markup. You cannot however use code tags to escape code tags. They are however
used in the same way as group or poem tags.

.br
A code\-block is treated as an object and given a single object number. [an \
option \ to \ number \ each \ line \ of \ code \ may \ be \ considered \ at \
some \ later \ time]

.br
.B use of code tags instead of poem compared, resulting output:

.nf
                    `Fury said to a
                   mouse, That he
                 met in the
               house,
            "Let us
              both go to
                law:  I will
                  prosecute
                    YOU.  \-\-Come,
                       I'll take no
                        denial; We
                     must have a
                 trial:  For
              really this
           morning I've
          nothing
         to do."
           Said the
             mouse to the
               cur, "Such
                 a trial,
                   dear Sir,
                         With
                     no jury
                  or judge,
                would be
              wasting
             our
              breath."
               "I'll be
                 judge, I'll
                   be jury,"
                         Said
                    cunning
                      old Fury:
                     "I'll
                      try the
                         whole
                          cause,
                             and
                        condemn
                       you
                      to
                       death."'
.fi

.br
From
.B SiSU
2.7.7 on you can number codeblocks by placing a hash after the opening code tag
code{# as demonstrated here:

.nf
1  |                    `Fury said to a
2  |                   mouse, That he
3  |                 met in the
4  |               house,
5  |            "Let us
6  |              both go to
7  |                law:  I will
8  |                  prosecute
9  |                    YOU.  \-\-Come,
10 |                       I'll take no
11 |                        denial; We
12 |                     must have a
13 |                 trial:  For
14 |              really this
15 |           morning I've
16 |          nothing
17 |         to do."
18 |           Said the
19 |             mouse to the
20 |               cur, "Such
21 |                 a trial,
22 |                   dear Sir,
23 |                         With
24 |                     no jury
25 |                  or judge,
26 |                would be
27 |              wasting
28 |             our
29 |              breath."
30 |               "I'll be
31 |                 judge, I'll
32 |                   be jury,"
33 |                         Said
34 |                    cunning
35 |                      old Fury:
36 |                     "I'll
37 |                      try the
38 |                         whole
39 |                          cause,
40 |                             and
41 |                        condemn
42 |                       you
43 |                      to
44 |                       death."'
.fi

.SH ADDITIONAL BREAKS \- LINEBREAKS WITHIN OBJECTS, COLUMN AND PAGE\-BREAKS

.SH LINE\-BREAKS

.br
To break a line within a "paragraph object", two backslashes \e\e
with a space before and a space or newline after them
may be used.

.nf
To break a line within a "paragraph object",
two backslashes \e\e with a space before
and a space or newline after them \e\e
may be used.
.fi

.br
The html break br enclosed in angle brackets (though undocumented) is available
in versions prior to 3.0.13 and 2.9.7 (it remains available for the time being,
but is depreciated).

.SH PAGE BREAKS

.br
Page breaks are only relevant and honored in some output formats. A page break
or a new page may be inserted manually using the following markup on a line on
its own:

.br
page new =\e= or breaks the page, starts a new page.

.br
page break \-\\- or breaks a column, starts a new column, if using columns,
else breaks the page, starts a new page.

.nf
\-\e\e\-
or
<:pb>
.fi

.br
or

.nf
=\e\e=
or
<:pn>
.fi

.SH BOOK INDEX

.br
To make an index append to paragraph the book index term relates to it, using
an equal sign and curly braces.

.br
Currently two levels are provided, a main term and if needed a sub\-term.
Sub\-terms are separated from the main term by a colon.

.nf
  Paragraph containing main term and sub\-term.
  ={Main term:sub\-term}
.fi

.br
The index syntax starts on a new line, but there should not be an empty line
between paragraph and index markup.

.br
The structure of the resulting index would be:

.nf
  Main term, 1
    sub\-term, 1
.fi

.br
Several terms may relate to a paragraph, they are separated by a semicolon. If
the term refers to more than one paragraph, indicate the number of paragraphs.

.nf
  Paragraph containing main term, second term and sub\-term.
  ={first term; second term: sub\-term}
.fi

.br
The structure of the resulting index would be:

.nf
  First term, 1,
  Second term, 1,
    sub\-term, 1
.fi

.br
If multiple sub\-terms appear under one paragraph, they are separated under the
main term heading from each other by a pipe symbol.

.nf
  Paragraph containing main term, second term and sub\-term.
  ={Main term:sub\-term+1|second sub\-term}
  A paragraph that continues discussion of the first sub\-term
.fi

.br
The plus one in the example provided indicates the first sub\-term spans one
additional paragraph. The logical structure of the resulting index would be:

.nf
  Main term, 1,
    sub\-term, 1\-3,
    second sub\-term, 1,
.fi

.SH COMPOSITE DOCUMENTS MARKUP
.br

.br
It is possible to build a document by creating a master document that requires
other documents. The documents required may be complete documents that could be
generated independently, or they could be markup snippets, prepared so as to be
easily available to be placed within another text. If the calling document is a
master document (built from other documents), it should be named with the
suffix
.B \.ssm
Within this document you would provide information on the other documents that
should be included within the text. These may be other documents that would be
processed in a regular way, or markup bits prepared only for inclusion within a
master document
.B \.sst
regular markup file, or
.B \.ssi
(insert/information) A secondary file of the composite document is built prior
to processing with the same prefix and the suffix
.B \._sst

.br
basic markup for importing a document into a master document

.nf
<< filename1.sst
<< filename2.ssi
.fi

.br
The form described above should be relied on. Within the
.I Vim
editor it results in the text thus linked becoming hyperlinked to the document
it is calling in which is convenient for editing.

.SH SISU FILETYPES
.br

.br
.B SiSU
has
.I plaintext
and binary filetypes, and can process either type of document.

.SH .SST \.SSM \.SSI MARKED UP PLAIN TEXT

.TP
.B SiSU¤b〕 documents are prepared as plain\-text (utf\-8) files with
.B SiSU
markup. They may make reference to and contain images (for example), which are
stored in the directory beneath them _sisu/image. 〔b¤SiSU
.I plaintext
markup files are of three types that may be distinguished by the file extension
used: regular text \.sst; master documents, composite documents that
incorporate other text, which can be any regular text or text insert; and
inserts the contents of which are like regular text except these are marked
 \.ssi and are not processed.

.br
.B SiSU
processing can be done directly against a sisu documents; which may be located
locally or on a remote server for which a url is provided.

.br
.B SiSU
source markup can be shared with the command:

.br
  sisu \-s [filename]

.SH SISU TEXT \- REGULAR FILES (.SST)

.br
The most common form of document in
.B SiSU,
see the section on
.B SiSU
markup.

.SH SISU MASTER FILES (.SSM)

.br
Composite documents which incorporate other
.B SiSU
documents which may be either regular
.B SiSU
text \.sst which may be generated independently, or inserts prepared solely for
the purpose of being incorporated into one or more master documents.

.br
The mechanism by which master files incorporate other documents is described as
one of the headings under under
.B SiSU
markup in the
.B SiSU
manual.

.br
Note: Master documents may be prepared in a similar way to regular documents,
and processing will occur normally if a \.sst file is renamed \.ssm without
requiring any other documents; the \.ssm marker flags that the document may
contain other documents.

.br
Note: a secondary file of the composite document is built prior to processing
with the same prefix and the suffix \._sst [^19]

.SH SISU INSERT FILES (.SSI)

.br
Inserts are documents prepared solely for the purpose of being incorporated
into one or more master documents. They resemble regular
.B SiSU
text files except they are ignored by the
.B SiSU
processor. Making a file a \.ssi file is a quick and convenient way of flagging
that it is not intended that the file should be processed on its own.

.SH SISUPOD, ZIPPED BINARY CONTAINER (SISUPOD.ZIP, \.SSP)

.br
A sisupod is a zipped
.B SiSU
text file or set of
.B SiSU
text files and any associated images that they contain (this will be extended
to include sound and multimedia\-files)

.TP
.B SiSU
.I plaintext
files rely on a recognised directory structure to find contents such as images
associated with documents, but all images for example for all documents
contained in a directory are located in the sub\-directory _sisu/image. Without
the ability to create a sisupod it can be inconvenient to manually identify all
other files associated with a document. A sisupod automatically bundles all
associated files with the document that is turned into a pod.

.br
The structure of the sisupod is such that it may for example contain a single
document and its associated images; a master document and its associated
documents and anything else; or the zipped contents of a whole directory of
prepared
.B SiSU
documents.

.br
The command to create a sisupod is:

.br
  sisu \-S [filename]

.br
Alternatively, make a pod of the contents of a whole directory:

.br
  sisu \-S

.br
.B SiSU
processing can be done directly against a sisupod; which may be located locally
or on a remote server for which a url is provided.

.br
<http://www.sisudoc.org/sisu/sisu_commands>

.br
<http://www.sisudoc.org/sisu/sisu_manual>

.SH CONFIGURATION
.br

.SH CONFIGURATION FILES

.SH CONFIG.YML

.br
.B SiSU
configration parameters are adjusted in the configuration file, which can be
used to override the defaults set. This includes such things as which directory
interim processing should be done in and where the generated output should be
placed.

.br
The
.B SiSU
configuration file is a yaml file, which means indentation is significant.

.br
.B SiSU
resource configuration is determined by looking at the following files if they
exist:

.br
  ./_sisu/v4/sisurc.yml

.br
  ./_sisu/sisurc.yml

.br
  ~/.sisu/v4/sisurc.yml

.br
  ~/.sisu/sisurc.yml

.br
  /etc/sisu/v4/sisurc.yml

.br
  /etc/sisu/sisurc.yml

.br
The search is in the order listed, and the first one found is used.

.br
In the absence of instructions in any of these it falls back to the internal
program defaults.

.br
Configuration determines the output and processing directories and the database
access details.

.br
If
.B SiSU
is installed a sample sisurc.yml may be found in /etc/sisu/sisurc.yml

.SH SISU_DOCUMENT_MAKE

.br
Most sisu document headers relate to metadata, the exception is the @make:
header which provides processing related information. The default contents of
the @make header may be set by placing them in a file sisu_document_make.

.br
The search order is as for resource configuration:

.br
  ./_sisu/v4/sisu_document_make

.br
  ./_sisu/sisu_document_make

.br
  ~/.sisu/v4/sisu_document_make

.br
  ~/.sisu/sisu_document_make

.br
  /etc/sisu/v4/sisu_document_make

.br
  /etc/sisu/sisu_document_make

.br
A sample sisu_document_make can be found in the _sisu/ directory under along
with the provided sisu markup samples.

.SH CSS \- CASCADING STYLE SHEETS (FOR HTML, XHTML AND XML)
.br

.br
CSS files to modify the appearance of
.B SiSU
html,
.I XHTML
or
.I XML
may be placed in the configuration directory: \./_sisu/css ; ~/.sisu/css or;
/etc/sisu/css and these will be copied to the output directories with the
command sisu \-CC.

.br
The basic CSS file for html output is html. css, placing a file of that name in
directory _sisu/css or equivalent will result in the default file of that name
being overwritten.

.br
.I HTML:
html. css

.br
.I XML
DOM: dom.css

.br
.I XML
SAX: sax.css

.br
.I XHTML:
xhtml. css

.br
The default homepage may use homepage.css or html. css

.br
Under consideration is to permit the placement of a CSS file with a different
name in directory _sisu/css directory or equivalent.[^20]

.SH ORGANISING CONTENT \- DIRECTORY STRUCTURE AND MAPPING
.br

.br
.B SiSU
v3 has new options for the source directory tree, and output directory
structures of which there are 3 alternatives.

.SH DOCUMENT SOURCE DIRECTORY

.br
The document source directory is the directory in which sisu processing
commands are given. It contains the sisu source files (.sst \.ssm \.ssi), or
(for sisu v3 may contain) subdirectories with language codes which contain the
sisu source files, so all English files would go in subdirectory en/, French in
fr/, Spanish in es/ and so on. ISO 639\-1 codes are used (as varied by po4a). A
list of available languages (and possible sub\-directory names) can be obtained
with the command "sisu \-\-help lang" The list of languages is limited to
langagues supported by XeTeX polyglosia.

.SH GENERAL DIRECTORIES

.nf
./subject_name/
% files stored at this level e.g. sisu_manual.sst or
% for sisu v3 may be under language sub\-directories
% e.g.
 \./subject_name/en
 \./subject_name/fr
 \./subject_name/es
 \./subject_name/_sisu
 \./subject_name/_sisu/css
 \./subject_name/_sisu/image
.fi

.SH DOCUMENT OUTPUT DIRECTORY STRUCTURES

.SH OUTPUT DIRECTORY ROOT

.br
The output directory root can be set in the sisurc.yml file. Under the root,
subdirectories are made for each directory in which a document set resides. If
you have a directory named poems or conventions, that directory will be created
under the output directory root and the output for all documents contained in
the directory of a particular name will be generated to subdirectories beneath
that directory (poem or conventions). A document will be placed in a
subdirectory of the same name as the document with the filetype identifier
stripped (.sst \.ssm)

.br
The last part of a directory path, representing the sub\-directory in which a
document set resides, is the directory name that will be used for the output
directory. This has implications for the organisation of document collections
as it could make sense to place documents of a particular subject, or type
within a directory identifying them. This grouping as suggested could be by
subject (sales_law, english_literature); or just as conveniently by some other
classification (X University). The mapping means it is also possible to place
in the same output directory documents that are for organisational purposes
kept separately, for example documents on a given subject of two different
institutions may be kept in two different directories of the same name, under a
directory named after each institution, and these would be output to the same
output directory. Skins could be associated with each institution on a
directory basis and resulting documents will take on the appropriate different
appearance.

.SH ALTERNATIVE OUTPUT STRUCTURES

.br
There are 3 possibile output structures described as being, by language, by
filetype or by filename, the selection is made in sisurc.yml

.nf
#% output_dir_structure_by: language; filetype; or filename
output_dir_structure_by: language   #(language & filetype, preferred?)
#output_dir_structure_by: filetype
#output_dir_structure_by: filename  #(default, closest to original v1 & v2)
.fi

.SH BY LANGUAGE

.br
The by language directory structure places output files

.br
The by language directory structure separates output files by language code
(all files of a given language), and within the language directory by filetype.

.br
Its selection is configured in sisurc.yml

.br
output_dir_structure_by: language

.nf
    |\-\- en
    |\-\- epub
    |\-\- hashes
    |\-\- html
    | |\-\- viral_spiral.david_bollier
    | |\-\- manifest
    | |\-\- qrcode
    | |\-\- odt
    | |\-\- pdf
    | |\-\- sitemaps
    | |\-\- txt
    | |\-\- xhtml
    | `\-\- xml
    |\-\- po4a
    | `\-\- live\-manual
    |     |\-\- po
    |     |\-\- fr
    |     `\-\- pot
    `\-\- _sisu
        |\-\- css
        |\-\- image
        |\-\- image_sys \-> \../../_sisu/image_sys
        `\-\- xml
            |\-\- rnc
            |\-\- rng
            `\-\- xsd
.fi

.br
#by: language subject_dir/en/manifest/filename.html

.SH BY FILETYPE

.br
The by filetype directory structure separates output files by filetype, all
html files in one directory pdfs in another and so on. Filenames are given a
language extension.

.br
Its selection is configured in sisurc.yml

.br
output_dir_structure_by: filetype

.nf
    |\-\- epub
    |\-\- hashes
    |\-\- html
    |\-\- viral_spiral.david_bollier
    |\-\- manifest
    |\-\- qrcode
    |\-\- odt
    |\-\- pdf
    |\-\- po4a
    |\-\- live\-manual
    |     |\-\- po
    |     |\-\- fr
    |     `\-\- pot
    |\-\- _sisu
    | |\-\- css
    | |\-\- image
    | |\-\- image_sys \-> \../../_sisu/image_sys
    | `\-\- xml
    |     |\-\- rnc
    |     |\-\- rng
    |     `\-\- xsd
    |\-\- sitemaps
    |\-\- txt
    |\-\- xhtml
    `\-\- xml
.fi

.br
#by: filetype subject_dir/html/filename/manifest.en.html

.SH BY FILENAME

.br
The by filename directory structure places most output of a particular file
(the different filetypes) in a common directory.

.br
Its selection is configured in sisurc.yml

.br
output_dir_structure_by: filename

.nf
    |\-\- epub
    |\-\- po4a
    |\-\- live\-manual
    |     |\-\- po
    |     |\-\- fr
    |     `\-\- pot
    |\-\- _sisu
    | |\-\- css
    | |\-\- image
    | |\-\- image_sys \-> \../../_sisu/image_sys
    | `\-\- xml
    |     |\-\- rnc
    |     |\-\- rng
    |     `\-\- xsd
    |\-\- sitemaps
    |\-\- src
    |\-\- pod
    `\-\- viral_spiral.david_bollier
.fi

.br
#by: filename subject_dir/filename/manifest.en.html

.SH REMOTE DIRECTORIES

.nf
./subject_name/
% containing sub_directories named after the generated files from which they are made
 \./subject_name/src
% contains shared source files text and binary e.g. sisu_manual.sst and sisu_manual.sst.zip
 \./subject_name/_sisu
% configuration file e.g. sisurc.yml
 \./subject_name/_sisu/skin
% skins in various skin directories doc, dir, site, yml
 \./subject_name/_sisu/css
 \./subject_name/_sisu/image
% images for documents contained in this directory
 \./subject_name/_sisu/mm
.fi

.SH SISUPOD

.nf
./sisupod/
% files stored at this level e.g. sisu_manual.sst
 \./sisupod/_sisu
% configuration file e.g. sisurc.yml
 \./sisupod/_sisu/skin
% skins in various skin directories doc, dir, site, yml
 \./sisupod/_sisu/css
 \./sisupod/_sisu/image
% images for documents contained in this directory
 \./sisupod/_sisu/mm
.fi

.SH ORGANISING CONTENT

.SH HOMEPAGES
.br

.br
.B SiSU
is about the ability to auto\-generate documents. Home pages are regarded as
custom built items, and are not created by
.B SiSU.
More accurately,
.B SiSU
has a default home page, which will not be appropriate for use with other
sites, and the means to provide your own home page instead in one of two ways
as part of a site's configuration, these being:

.br
1. through placing your home page and other custom built documents in the
subdirectory _sisu/home/ (this probably being the easier and more convenient
option)

.br
2. through providing what you want as the home page in a skin,

.br
Document sets are contained in directories, usually organised by site or
subject. Each directory can/should have its own homepage. See the section on
directory structure and organisation of content.

.SH HOME PAGE AND OTHER CUSTOM BUILT PAGES IN A SUB\-DIRECTORY

.br
Custom built pages, including the home page index.html may be placed within the
configuration directory _sisu/home/ in any of the locations that is searched
for the configuration directory, namely \./_sisu ; ~/_sisu ; /etc/sisu From
there they are copied to the root of the output directory with the command:

.br
  sisu \-CC

.SH MARKUP AND OUTPUT EXAMPLES
.br

.SH MARKUP EXAMPLES

.br
Current markup examples and document output samples are provided off
<http://sisudoc.org> or <http://www.jus.uio.no/sisu> and in the sisu
\-markup\-sample package available off <http://sources.sisudoc.org>

.br
For some documents hardly any markup at all is required at all, other than a
header, and an indication that the levels to be taken into account by the
program in generating its output are.

.SH SISU MARKUP SAMPLES

.br
A few additional sample books prepared as sisu markup samples, output formats
to be generated using
.B SiSU
are contained in a separate package sisu \-markup\-samples. sisu
\-markup\-samples contains books (prepared using sisu markup), that were
released by their authors various licenses mostly different Creative Commons
licences that do not permit inclusion in the
.B Debian
Project as they have requirements that do not meet the
.B Debian
Free Software Guidelines for various reasons, most commonly that they require
that the original substantive text remain unchanged, and sometimes that the
works be used only non\-commercially.

.br
.I Accelerando,
Charles Stross (2005)
accelerando.charles_stross.sst

.br
.I Alice's Adventures in Wonderland,
Lewis Carroll (1865)
alices_adventures_in_wonderland.lewis_carroll.sst

.br
.I CONTENT,
Cory Doctorow (2008)
content.cory_doctorow.sst

.br
.I Democratizing Innovation,
Eric von Hippel (2005)
democratizing_innovation.eric_von_hippel.sst

.br
.I Down and Out in the Magic Kingdom,
Cory Doctorow (2003)
down_and_out_in_the_magic_kingdom.cory_doctorow.sst

.br
.I For the Win,
Cory Doctorow (2010)
for_the_win.cory_doctorow.sst

.br
.I Free as in Freedom \- Richard Stallman's Crusade for Free Software,
Sam Williams (2002)
free_as_in_freedom.richard_stallman_crusade_for_free_software.sam_williams.sst

.br
.I Free as in Freedom 2.0 \- Richard Stallman and the Free Software Revolution,
Sam Williams (2002), Richard M. Stallman (2010)
free_as_in_freedom_2.richard_stallman_and_the_free_software_revolution.sam_williams.richard_stallman.sst

.br
.I Free Culture \- How Big Media Uses Technology and the Law to Lock Down
Culture and Control Creativity,
Lawrence Lessig (2004)
free_culture.lawrence_lessig.sst

.br
.I Free For All \- How Linux and the Free Software Movement Undercut the High
Tech Titans,
Peter Wayner (2002)
free_for_all.peter_wayner.sst

.br
.I GNU GENERAL PUBLIC LICENSE v2,
Free Software Foundation (1991)
gpl2.fsf.sst

.br
.I GNU GENERAL PUBLIC LICENSE v3,
Free Software Foundation (2007)
gpl3.fsf.sst

.br
.I Gulliver's Travels,
Jonathan Swift (1726 / 1735)
gullivers_travels.jonathan_swift.sst

.br
.I Little Brother,
Cory Doctorow (2008)
little_brother.cory_doctorow.sst

.br
.I The Cathederal and the Bazaar,
Eric Raymond (2000)
the_cathedral_and_the_bazaar.eric_s_raymond.sst

.br
.I The Public Domain \- Enclosing the Commons of the Mind,
James Boyle (2008)
the_public_domain.james_boyle.sst

.br
.I The Wealth of Networks \- How Social Production Transforms Markets and
Freedom,
Yochai Benkler (2006)
the_wealth_of_networks.yochai_benkler.sst

.br
.I Through the Looking Glass,
Lewis Carroll (1871)
through_the_looking_glass.lewis_carroll.sst

.br
.I Two Bits \- The Cultural Significance of Free Software,
Christopher Kelty (2008)
two_bits.christopher_kelty.sst

.br
.I UN Contracts for International Sale of Goods,
UN (1980)
un_contracts_international_sale_of_goods_convention_1980.sst

.br
.I Viral Spiral,
David Bollier (2008)
viral_spiral.david_bollier.sst

.SH SISU SEARCH \- INTRODUCTION
.br

.br
.B SiSU
output can easily and conveniently be indexed by a number of standalone
indexing tools, such as Lucene, Hyperestraier.

.br
Because the document structure of sites created is clearly defined, and the
text
.I object citation system
is available hypothetically at least, for all forms of output, it is possible
to search the sql database, and either read results from that database, or just
as simply map the results to the html output, which has richer text markup.

.br
In addition to this
.B SiSU
has the ability to populate a relational sql type database with documents at an
object level, with objects numbers that are shared across different output
types, which make them searchable with that degree of granularity. Basically,
your match criteria is met by these documents and at these locations within
each document, which can be viewed within the database directly or in various
output formats.

.SH SQL
.br

.SH POPULATING SQL TYPE DATABASES

.br
.B SiSU
feeds sisu markupd documents into sql type databases
.I PostgreSQL
[^21] and/or
.I SQLite
[^22] database together with information related to document structure.

.br
This is one of the more interesting output forms, as all the structural data of
the documents are retained (though can be ignored by the user of the database
should they so choose). All site texts/documents are (currently) streamed to
four tables:

.br
  * one containing semantic (and other) headers, including, title, author,
  subject, (the
  .I Dublin Core.
  ..);

.br
  * another the substantive texts by individual "paragraph" (or object) \-
  along with structural information, each paragraph being identifiable by its
  paragraph number (if it has one which almost all of them do), and the
  substantive text of each paragraph quite naturally being searchable (both in
  formatted and clean text versions for searching); and

.br
  * a third containing endnotes cross\-referenced back to the paragraph from
  which they are referenced (both in formatted and clean text versions for
  searching).

.br
  * a fourth table with a one to one relation with the headers table contains
  full text versions of output, eg. pdf, html, xml, and
  .I ascii.

.br
There is of course the possibility to add further structures.

.br
At this level
.B SiSU
loads a relational database with documents chunked into objects, their smallest
logical structurally constituent parts, as text objects, with their object
citation number and all other structural information needed to construct the
document. Text is stored (at this text object level) with and without
elementary markup tagging, the stripped version being so as to facilitate ease
of searching.

.br
Being able to search a relational database at an object level with the
.B SiSU
citation system is an effective way of locating content generated by
.B SiSU.
As individual text objects of a document stored (and indexed) together with
object numbers, and all versions of the document have the same numbering,
complex searches can be tailored to return just the locations of the search
results relevant for all available output formats, with live links to the
precise locations in the database or in html/xml documents; or, the structural
information provided makes it possible to search the full contents of the
database and have headings in which search content appears, or to search only
headings etc. (as the
.I Dublin Core
is incorporated it is easy to make use of that as well).

.SH POSTGRESQL
.br

.SH NAME

.br
.B SiSU
\- Structured information, Serialized Units \- a document publishing system,
postgresql dependency package

.SH DESCRIPTION

.br
Information related to using postgresql with sisu (and related to the
sisu_postgresql dependency package, which is a dummy package to install
dependencies needed for
.B SiSU
to populate a postgresql database, this being part of
.B SiSU
\- man sisu) .

.SH SYNOPSIS

.br
  sisu \-D [instruction] [filename/wildcard \ if \ required]

.br
  sisu \-D \-\-pg \-\-[instruction] [filename/wildcard \ if \ required]

.SH COMMANDS

.br
Mappings to two databases are provided by default, postgresql and sqlite, the
same commands are used within sisu to construct and populate databases however
\-d (lowercase) denotes sqlite and \-D (uppercase) denotes postgresql,
alternatively \-\-sqlite or \-\-pgsql may be used

.br
.B \-D or \-\-pgsql
may be used interchangeably.

.SH CREATE AND DESTROY DATABASE

.TP
.B \-\-pgsql \-\-createall
initial step, creates required relations (tables, indexes) in existing
(postgresql) database (a database should be created manually and given the same
name as working directory, as requested) (rb.dbi)

.TP
.B sisu \-D \-\-createdb
creates database where no database existed before

.TP
.B sisu \-D \-\-create
creates database tables where no database tables existed before

.TP
.B sisu \-D \-\-Dropall
destroys database (including all its content)! kills data and drops tables,
indexes and database associated with a given directory (and directories of the
same name).

.TP
.B sisu \-D \-\-recreate
destroys existing database and builds a new empty database structure

.SH IMPORT AND REMOVE DOCUMENTS

.TP
.B sisu \-D \-\-import \-v [filename/wildcard]
populates database with the contents of the file. Imports documents(s)
specified to a postgresql database (at an object level).

.TP
.B sisu \-D \-\-update \-v [filename/wildcard]
updates file contents in database

.TP
.B sisu \-D \-\-remove \-v [filename/wildcard]
removes specified document from postgresql database.

.SH SQLITE
.br

.SH NAME

.br
.B SiSU
\- Structured information, Serialized Units \- a document publishing system.

.SH DESCRIPTION

.br
Information related to using sqlite with sisu (and related to the sisu_sqlite
dependency package, which is a dummy package to install dependencies needed for
.B SiSU
to populate an sqlite database, this being part of
.B SiSU
\- man sisu) .

.SH SYNOPSIS

.br
  sisu \-d [instruction] [filename/wildcard \ if \ required]

.br
  sisu \-d \-\-(sqlite|pg) \-\-[instruction] [filename/wildcard \ if \
  required]

.SH COMMANDS

.br
Mappings to two databases are provided by default, postgresql and sqlite, the
same commands are used within sisu to construct and populate databases however
\-d (lowercase) denotes sqlite and \-D (uppercase) denotes postgresql,
alternatively \-\-sqlite or \-\-pgsql may be used

.br
.B \-d or \-\-sqlite
may be used interchangeably.

.SH CREATE AND DESTROY DATABASE

.TP
.B \-\-sqlite \-\-createall
initial step, creates required relations (tables, indexes) in existing (sqlite)
database (a database should be created manually and given the same name as
working directory, as requested) (rb.dbi)

.TP
.B sisu \-d \-\-createdb
creates database where no database existed before

.TP
.B sisu \-d \-\-create
creates database tables where no database tables existed before

.TP
.B sisu \-d \-\-dropall
destroys database (including all its content)! kills data and drops tables,
indexes and database associated with a given directory (and directories of the
same name).

.TP
.B sisu \-d \-\-recreate
destroys existing database and builds a new empty database structure

.SH IMPORT AND REMOVE DOCUMENTS

.TP
.B sisu \-d \-\-import \-v [filename/wildcard]
populates database with the contents of the file. Imports documents(s)
specified to an sqlite database (at an object level).

.TP
.B sisu \-d \-\-update \-v [filename/wildcard]
updates file contents in database

.TP
.B sisu \-d \-\-remove \-v [filename/wildcard]
removes specified document from sqlite database.

.SH INTRODUCTION
.br

.SH SEARCH \- DATABASE FRONTEND SAMPLE, UTILISING DATABASE AND SISU FEATURES,
INCLUDING OBJECT CITATION NUMBERING (BACKEND CURRENTLY POSTGRESQL)

.br
Sample search frontend <http://search.sisudoc.org> [^23] A small database and
sample query front\-end (search from) that makes use of the citation system,
.I object citation numbering
to demonstrates functionality.[^24]

.br
.B SiSU
can provide information on which documents are matched and at what locations
within each document the matches are found. These results are relevant across
all outputs using
.I object citation numbering,
which includes html,
.I XML,
.I EPUB,
.I LaTeX,
.I PDF
and indeed the
.I SQL
database. You can then refer to one of the other outputs or in the
.I SQL
database expand the text within the matched objects (paragraphs) in the
documents matched.

.br
Note you may set results either for documents matched and object number
locations within each matched document meeting the search criteria; or display
the names of the documents matched along with the objects (paragraphs) that
meet the search criteria.[^25]

.TP
.B sisu \-F \-\-webserv\-webrick
builds a cgi web search frontend for the database created

.br
The following is feedback on the setup on a machine provided by the help
command:

.br
  sisu \-\-help sql

.nf
Postgresql
  user:             ralph
  current db set:   SiSU_sisu
  port:             5432
  dbi connect:      DBI:Pg:database=SiSU_sisu;port=5432
sqlite
  current db set:   /home/ralph/sisu_www/sisu/sisu_sqlite.db
  dbi connect       DBI:SQLite:/home/ralph/sisu_www/sisu/sisu_sqlite.db
.fi

.br
Note on databases built

.br
By default, [unless \ otherwise \ specified] databases are built on a directory
basis, from collections of documents within that directory. The name of the
directory you choose to work from is used as the database name, i.e. if you are
working in a directory called /home/ralph/ebook the database SiSU_ebook is
used. [otherwise \ a \ manual \ mapping \ for \ the \ collection \ is \
necessary]

.SH SEARCH FORM

.TP
.B sisu \-F
generates a sample search form, which must be copied to the web\-server cgi
directory

.TP
.B sisu \-F \-\-webserv\-webrick
generates a sample search form for use with the webrick server, which must be
copied to the web\-server cgi directory

.TP
.B sisu \-W
starts the webrick server which should be available wherever sisu is properly
installed

.br
The generated search form must be copied manually to the webserver directory as
instructed

.SH SISU_WEBRICK
.br

.SH NAME

.br
.B SiSU
\- Structured information, Serialized Units \- a document publishing system

.SH SYNOPSIS

.br
sisu_webrick [port]

.br
or

.br
sisu \-W [port]

.SH DESCRIPTION

.br
sisu_webrick is part of
.B SiSU
(man sisu) sisu_webrick starts
.B Ruby
' s Webrick web\-server and points it to the directories to which
.B SiSU
output is written, providing a list of these directories (assuming
.B SiSU
is in use and they exist).

.br
The default port for sisu_webrick is set to 8081, this may be modified in the
yaml file: ~/.sisu/sisurc.yml a sample of which is provided as
/etc/sisu/sisurc.yml (or in the equivalent directory on your system).

.SH SUMMARY OF MAN PAGE

.br
sisu_webrick, may be started on it's own with the command: sisu_webrick [port]
or using the sisu command with the \-W flag: sisu \-W [port]

.br
where no port is given and settings are unchanged the default port is 8081

.SH DOCUMENT PROCESSING COMMAND FLAGS

.br
sisu \-W [port] starts
.B Ruby
Webrick web\-server, serving
.B SiSU
output directories, on the port provided, or if no port is provided and the
defaults have not been changed in ~/.sisu/sisurc.yaml then on port 8081

.SH SUMMARY OF FEATURES
.br

.br
* sparse/minimal markup (clean utf\-8 source texts). Documents are prepared in
a single
.I UTF\-8
file using a minimalistic mnemonic syntax. Typical literature, documents like
"War and Peace" require almost no markup, and most of the headers are optional.

.br
* markup is easily readable/parsable by the human eye, (basic markup is simpler
and more sparse than the most basic
.I HTML
) , [this \ may \ also \ be \ converted \ to \ .I \ XML \ representations \ of
\ the \ same \ input/source \ document].

.br
* markup defines document structure (this may be done once in a header
pattern\-match description, or for heading levels individually); basic text
attributes (bold, italics, underscore, strike\-through etc.) as required; and
semantic information related to the document (header information, extended
beyond the Dublin core and easily further extended as required); the headers
may also contain processing instructions.
.B SiSU
markup is primarily an abstraction of document structure and document metadata
to permit taking advantage of the basic strengths of existing alternative
practical standard ways of representing documents [be \ that \ browser \
viewing, \ paper \ publication, \ sql \ search \ etc.] (html, epub, xml, odf,
latex, pdf, sql)

.br
* for output produces reasonably elegant output of established industry and
institutionally accepted open standard formats.[3] takes advantage of the
different strengths of various standard formats for representing documents,
amongst the output formats currently supported are:

.br
*
.I HTML
\- both as a single scrollable text and a segmented document

.br
*
.I XHTML

.br
*
.I EPUB

.br
*
.I XML
\- both in sax and dom style xml structures for further development as required

.br
*
.I ODT
\- Open Document Format text, the iso standard for document storage

.br
*
.I LaTeX
\- used to generate pdf

.br
*
.I PDF
(via
.I LaTeX
)

.br
*
.I SQL
\- population of an sql database (
.I PostgreSQL
or
.I SQLite
) , (at the same object level that is used to cite text within a document)

.br
Also produces: concordance files; document content certificates (md5 or sha256
digests of headings, paragraphs, images etc.) and html manifests (and sitemaps
of content). (b) takes advantage of the strengths implicit in these very
different output types, (e.g. PDFs produced using typesetting of
.I LaTeX,
databases populated with documents at an individual object/paragraph level,
making possible
.I granular search
(and related possibilities))

.br
* ensuring content can be cited in a meaningful way regardless of selected
output format. Online publishing (and publishing in multiple document formats)
lacks a useful way of citing text internally within documents (important to
academics generally and to lawyers) as page numbers are meaningless across
browsers and formats. sisu seeks to provide a common way of pinpoint the text
within a document, (which can be utilized for citation and by search engines).
The outputs share a common numbering system that is meaningful (to man and
machine) across all digital outputs whether paper, screen, or database
oriented, (pdf,
.I HTML,
.I EPUB,
xml, sqlite, postgresql) , this numbering system can be used to reference
content.

.br
* Granular search within documents.
.I SQL
databases are populated at an object level (roughly headings, paragraphs,
verse, tables) and become searchable with that degree of granularity, the
output information provides the object/paragraph numbers which are relevant
across all generated outputs; it is also possible to look at just the matching
paragraphs of the documents in the database; [output \ indexing \ also \ work \
well \ with \ search \ indexing \ tools \ like \ hyperestraier].

.br
* long term maintainability of document collections in a world of changing
formats, having a very sparsely marked\-up source document base. there is a
considerable degree of future\-proofing, output representations are
"upgradeable", and new document formats may be added. e.g. addition of odf
(open document text) module in 2006, epub in 2009 and in future html5 output
sometime in future, without modification of existing prepared texts

.br
*
.I SQL
search aside, documents are generated as required and static once generated.

.br
* documents produced are static files, and may be batch processed, this needs
to be done only once but may be repeated for various reasons as desired
(updated content, addition of new output formats, updated technology document
presentations/representations)

.br
* document source (
.I plaintext
utf\-8) if shared on the net may be used as input and processed locally to
produce the different document outputs

.br
* document source may be bundled together (automatically) with associated
documents (multiple language versions or master document with inclusions) and
images and sent as a zip file called a sisupod, if shared on the net these too
may be processed locally to produce the desired document outputs

.br
* generated document outputs may automatically be posted to remote sites.

.br
* for basic document generation, the only software dependency is
.B Ruby,
and a few standard Unix tools (this covers
.I plaintext,
.I HTML,
.I EPUB,
.I XML,
.I ODF,
.I LaTeX
) . To use a database you of course need that, and to convert the
.I LaTeX
generated to pdf, a latex processor like tetex or texlive.

.br
* as a developers tool it is flexible and extensible

.br
Syntax highlighting for
.B SiSU
markup is available for a number of text editors.

.br
.B SiSU
is less about document layout than about finding a way with little markup to be
able to construct an abstract representation of a document that makes it
possible to produce multiple representations of it which may be rather
different from each other and used for different purposes, whether layout and
publishing, or search of content

.br
i.e. to be able to take advantage from this minimal preparation starting point
of some of the strengths of rather different established ways of representing
documents for different purposes, whether for search (relational database, or
indexed flat files generated for that purpose whether of complete documents, or
say of files made up of objects), online viewing (e.g. html, xml, pdf) , or
paper publication (e.g. pdf) \...

.br
the solution arrived at is by extracting structural information about the
document (about headings within the document) and by tracking objects (which
are serialized and also given hash values) in the manner described. It makes
possible representations that are quite different from those offered at
present. For example objects could be saved individually and identified by
their hashes, with an index of how the objects relate to each other to form a
document.

.TP
.BI 1.
objects include: headings, paragraphs, verse, tables, images, but not
footnotes/endnotes which are numbered separately and tied to the object from
which they are referenced.

.br
.TP
.BI 2.
i.e. the

.br
.I HTML,

.br
.I PDF,

.br
.I EPUB,

.br
.I ODT

.br
outputs are each built individually and optimised for that form of
presentation, rather than for example the html being a saved version of the
odf, or the pdf being a saved version of the html.

.br
.TP
.BI 3.
the different heading levels

.br
.TP
.BI 4.
units of text, primarily paragraphs and headings, also any tables, poems,
code-blocks

.br
.TP
.BI 5.
An open standard format for e-books

.br
.TP
.BI 6.
Open Document Format (

.br
.I ODF

.br
) text

.br
.TP
.BI 7.
Specification submitted by Adobe to ISO to become a full open ISO
specification

.br
<http://www.linux-watch.com/news/NS7542722606.html>

.br
.TP
.BI 8.
ISO standard ISO/IEC 26300:2006

.br
.TP
.BI *1.
square brackets

.br
.TP
.BI *2.
square brackets

.br
.TP
.BI +1.
square brackets

.br
.TP
.BI 9.
<http://www.jus.uio.no/sisu/man/>

.br
.TP
.BI 10.
<http://www.jus.uio.no/sisu/man/sisu.1.html>

.br
.TP
.BI 11.
From sometime after SiSU 0.58 it should be possible to describe SiSU markup
using SiSU, which though not an original design goal is useful.

.br
.TP
.BI 12.
files should be prepared using

.br
.I UTF-8

.br
character encoding

.br
.TP
.BI 13.
a footnote or endnote

.br
.TP
.BI 14.
self contained endnote marker & endnote in one

.br
.TP
.BI *.
unnumbered asterisk footnote/endnote, insert multiple asterisks if required

.br
.TP
.BI **.
another unnumbered asterisk footnote/endnote

.br
.TP
.BI *3.
editors notes, numbered asterisk footnote/endnote series

.br
.TP
.BI +2.
editors notes, numbered asterisk footnote/endnote series

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.TP
.BI 15.
<http://www.sisudoc.org/>

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.TP
.BI 16.
<http://www.ruby-lang.org/en/>

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.BI 18.
Table from the Wealth of Networks by Yochai Benkler

.br
<http://www.jus.uio.no/sisu/the_wealth_of_networks.yochai_benkler>

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.BI 19.
\.ssc (for composite) is under consideration but \._sst makes clear that this
is not a regular file to be worked on, and thus less likely that people will
have "accidents", working on a \.ssc file that is overwritten by subsequent
processing. It may be however that when the resulting file is shared \.ssc is an
appropriate suffix to use.

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.BI 21.
<http://www.postgresql.org/>

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<http://advocacy.postgresql.org/>

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<http://en.wikipedia.org/wiki/Postgresql>

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.BI 22.
<http://www.hwaci.com/sw/sqlite/>

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<http://en.wikipedia.org/wiki/Sqlite>

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.BI 23.
<http://search.sisudoc.org>

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.TP
.BI 24.
(which could be extended further with current back-end). As regards scaling
of the database, it is as scalable as the database (here Postgresql) and
hardware allow.

.br
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.BI 25.
of this feature when demonstrated to an IBM software innovations evaluator
in 2004 he said to paraphrase: this could be of interest to us. We have large
document management systems, you can search hundreds of thousands of documents
and we can tell you which documents meet your search criteria, but there is no
way we can tell you without opening each document where within each your
matches are found.

.br

.TP
.SH SEE ALSO
       sisu(1),
       sisu-epub(1),
       sisu-harvest(1),
       sisu-html(1),
       sisu-odf(1),
       sisu-pdf(1),
       sisu-pg(1),
       sisu-sqlite(1),
       sisu-txt(1).
       sisu_vim(7)
.TP
.SH HOMEPAGE
       More information about SiSU can be found at <http://www.sisudoc.org/> or <http://www.jus.uio.no/sisu/>
.TP
.SH SOURCE
       <http://sources.sisudoc.org/>
.TP
.SH AUTHOR
       SiSU is written by Ralph Amissah <ralph@amissah.com>